509 lines
24 KiB
Python
509 lines
24 KiB
Python
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# ============================================================
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# Система: Единая библиотека, Центр ИИ НИУ ВШЭ
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# Модуль: ExperimentPipeline
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# Авторы: Полежаев В.А., Хританков А.С.
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# Дата создания: 2024 г.
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# ============================================================
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import json
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import logging
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import posixpath
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import urllib.parse
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import uuid
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from functools import reduce
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from operator import mul
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from fastapi import HTTPException
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from httpx import AsyncClient
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from exp_pipeline.box import get_path_inside_box, get_default_box
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from exp_pipeline.config import UNIP_FILES_API
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from exp_pipeline.schema import ConnectedBox, TrialInput, TrialOutputVar, TrialStartVar, StartVarBoxPath, \
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DATATYPE_TO_CONTENT_TYPE
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from location import parse_location
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UNIP_FILES_USER_PASSWORD = '**'
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logger = logging.getLogger(__name__)
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def _reshape(lst: list, shape: list[int]):
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if len(shape) == 1:
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return lst
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n = reduce(mul, shape[1:])
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return [_reshape(lst[i * n:(i + 1) * n], shape[1:]) for i in range(len(lst) // n)]
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async def _save_data_to_file(http_client: AsyncClient,
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app_name: str,
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user_id: str,
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s3_box_name: str,
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input_data: object,
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shape: list[int],
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content_type: str) -> str:
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data = input_data
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if isinstance(data, list):
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data = _reshape(data, shape)
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# в текущей реализации все сохраняется в текст в формате JSON
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str_data = json.dumps(data)
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content_type = 'application/json'
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# создание файла в заданной файловой группе,
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# если файловой группы нет, то files API создаст ее
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url_prefix = f'{app_name}/files/{s3_box_name}/'
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create_file_url = urllib.parse.urljoin(UNIP_FILES_API,
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url_prefix)
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res = await http_client.post(create_file_url, auth=(user_id, UNIP_FILES_USER_PASSWORD))
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if res.status_code != 201:
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logger.error(f'Files API request error (create file); PUT {create_file_url}; '
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f'Returned code: {res.status_code}')
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logger.error(f'Response content {res.content}')
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raise HTTPException(status_code=503, detail="Service unavailable")
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res_data = res.json()
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put_url = res_data['presigned_put_url']
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new_file_name: str = res_data['name']
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if new_file_name.startswith(url_prefix):
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new_file_name = new_file_name[len(url_prefix):]
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path = new_file_name
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binary_data = str_data.encode('utf-8')
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data_len = len(str_data)
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headers = {'Content-Type': content_type, 'Content-Length': str(data_len)}
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res = await http_client.put(put_url, content=binary_data, headers=headers,
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auth=(user_id, UNIP_FILES_USER_PASSWORD))
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if res.status_code != 201 and res.status_code != 200:
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logger.error(f'S3 request error (put file content); PUT {put_url}; '
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f'Returned code: {res.status_code}')
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logger.error(f'Response content {res.content}')
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raise HTTPException(status_code=503, detail="Service unavailable")
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# await asyncio.sleep(5)
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return path
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def _get_var_box(user_id: str,
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pipeline_name: str,
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connected_boxes: list[ConnectedBox],
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box_section: dict | None
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) -> ConnectedBox:
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connected_boxes_by_name = {cb.name: cb for cb in connected_boxes}
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if box_section and 'name' in box_section:
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name = box_section['name']
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if name not in connected_boxes_by_name:
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logger.error(f'Connected box {name} not specified in pipeline {pipeline_name}')
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raise HTTPException(status_code=503, detail="Service unavailable")
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return connected_boxes_by_name[name]
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return get_default_box(user_id, pipeline_name, connected_boxes)
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async def _get_input_var_location(http_client: AsyncClient,
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app_name: str,
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user_id: str,
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var_box: ConnectedBox,
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passed_var_input: TrialInput) -> tuple[str, str]:
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if passed_var_input.datatype in {"FILE", "WEBSITE"}:
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if not isinstance(passed_var_input.data, str):
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raise HTTPException(status_code=400, detail=f"Passed input var {passed_var_input.name} "
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f"datatype is {passed_var_input.datatype},"
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f" but data is not instance of 'str'")
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if passed_var_input.datatype == 'FILE' and not passed_var_input.content_type:
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raise HTTPException(status_code=400, detail=f"Passed input var {passed_var_input.name} "
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f"datatype is FILE, content_type is required")
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if passed_var_input.datatype == 'WEBSITE':
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passed_var_input.content_type = DATATYPE_TO_CONTENT_TYPE['WEBSITE']
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file_group_name, file_name = parse_location(passed_var_input.data)
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if not file_group_name:
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raise HTTPException(status_code=400,
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detail=f"At least file group must be passed for input of var {passed_var_input.name}, "
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f"given: {passed_var_input.data}")
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if not file_name:
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# parse_location возвращает значения, которые не начинаются и не заканчиваются символом '/';
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# если передано имя файловой группы, то путь должен оканчиваться '/' -
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# монтируется папка;
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path = file_group_name + '/'
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else:
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# если передано имя файловой группы и имя файла, то объединяем их -
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# монтируется файл;
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path = posixpath.join(file_group_name, file_name)
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return path, passed_var_input.content_type
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else:
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if not passed_var_input.data:
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raise HTTPException(status_code=400, detail=f"Passed input var {passed_var_input.name} "
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f"datatype is {passed_var_input.datatype}, but data not passed")
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# создается временный файл во временной файловой группе, путь к нему возвращается -
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# монтируется файл;
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path = await _save_data_to_file(http_client=http_client,
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app_name=app_name,
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user_id=user_id,
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s3_box_name=var_box.s3_box_name,
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input_data=passed_var_input.data,
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shape=passed_var_input.shape,
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content_type=passed_var_input.content_type)
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return path, 'application/json'
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def _get_input_var_datatype(passed_var_input: TrialInput):
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if passed_var_input.datatype == 'WEBSITE':
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return 'WEBSITE'
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return 'FILE'
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def _get_input_var_in_box_path(user_id: str,
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input_location: str | None) -> str:
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in_box_path = get_path_inside_box(user_id, input_location)
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return in_box_path
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def _get_var_mount_path(var_section: dict):
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return var_section.get('path', None)
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async def _construct_input_var(http_client: AsyncClient,
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app_name: str,
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user_id: str,
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pipeline_name: str,
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connected_boxes: list[ConnectedBox],
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var_section: dict,
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var_input: TrialInput) -> TrialStartVar:
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var_name = var_section['name']
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box_section = None
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if 'mountFrom' in var_section:
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mount_from_section = var_section['mountFrom']
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if 'box' in mount_from_section:
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box_section = mount_from_section['box']
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var_box = _get_var_box(user_id=user_id,
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pipeline_name=pipeline_name,
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connected_boxes=connected_boxes,
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box_section=box_section)
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if var_box.dataset_ref_box_name:
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logger.info(f'Input var {var_name} connected box {var_box.name} cannot be dataset')
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raise HTTPException(status_code=503, detail="Service unavailable")
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input_location, content_type = await _get_input_var_location(http_client=http_client,
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app_name=app_name,
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user_id=user_id,
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var_box=var_box,
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passed_var_input=var_input)
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datatype = _get_input_var_datatype(passed_var_input=var_input)
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logger.info(f'Input var: {var_name}; input location: {input_location}')
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in_box_path = _get_input_var_in_box_path(user_id=user_id, input_location=input_location)
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mount_path = _get_var_mount_path(var_section=var_section)
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var_box_path = StartVarBoxPath(in_box_path=in_box_path, box=var_box, mount_path=mount_path)
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sv = TrialStartVar(name=var_name, box_path=var_box_path, files_location=input_location,
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datatype=datatype, content_type=content_type, shape=var_input.shape)
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return sv
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async def _create_file_group(http_client: AsyncClient,
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app_name: str,
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user_id: str,
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box_name: str,
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location: str):
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url_prefix = f'/{app_name}/files/{box_name}'
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url_prefix = posixpath.join(url_prefix, location)
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create_fg_url = urllib.parse.urljoin(UNIP_FILES_API, url_prefix)
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res = await http_client.put(create_fg_url, auth=(user_id, UNIP_FILES_USER_PASSWORD))
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if res.status_code != 200:
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logger.error(f'Files API request error (create file-group); PUT {create_fg_url}; '
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f'Returned code: {res.status_code}')
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logger.error(f'Response content {res.content}')
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raise HTTPException(status_code=503, detail="Service unavailable")
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async def _get_output_var_location(http_client: AsyncClient,
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app_name: str,
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user_id: str,
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var_box: ConnectedBox,
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passed_var: TrialOutputVar | None):
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passed = passed_var.data if passed_var else None
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file_group_name, file_name = parse_location(passed)
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if file_name:
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# выходные переменные всегда должны быть файловыми группами
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raise HTTPException(status_code=400,
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detail=f'File name must NOT be specified for output var {passed_var.name}; '
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f'given location {passed}')
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if passed_var.datatype == 'WEBSITE':
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passed_var.content_type = DATATYPE_TO_CONTENT_TYPE['WEBSITE']
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if not file_group_name:
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# если передана пустая локация, то генерируется уникальное имя файловой группы,
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# Files API не поддерживает генерацию имен при создании пустых файловых групп;
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path = str(uuid.uuid4()) + '/'
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else:
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# если передана файловая группа, то нужно дописать '/',
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# посколькуо parse_location всегда возвращает значения, которые не начинаются
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# и не оканчиваются '/'
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path = file_group_name + '/'
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await _create_file_group(http_client, app_name, user_id, var_box.s3_box_name, path)
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return path, passed_var.content_type
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def _get_output_var_in_box_path(
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user_id: str,
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output_location: str | None
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) -> str:
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in_box_path = get_path_inside_box(user_id, output_location)
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return in_box_path
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def _get_output_var_datatype(passed_var: TrialOutputVar):
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if not passed_var.datatype:
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return 'FILE'
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return passed_var.datatype
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async def _construct_output_var(http_client: AsyncClient,
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app_name: str,
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user_id: str,
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pipeline_name: str,
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connected_boxes: list[ConnectedBox],
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var_section: dict,
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trial_output_var: TrialOutputVar) -> TrialStartVar:
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var_name = var_section['name']
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box_section = None
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if 'mountFrom' in var_section:
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mount_from_section = var_section['mountFrom']
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if 'box' in mount_from_section:
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box_section = mount_from_section['box']
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var_box = _get_var_box(user_id=user_id,
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pipeline_name=pipeline_name,
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connected_boxes=connected_boxes,
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box_section=box_section)
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if var_box.dataset_ref_box_name:
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logger.info(f'Output var {var_name} connected box {var_box.name} cannot be dataset')
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raise HTTPException(status_code=503, detail="Service unavailable")
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output_location, content_type = await _get_output_var_location(http_client=http_client,
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app_name=app_name,
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user_id=user_id,
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var_box=var_box,
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passed_var=trial_output_var)
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datatype = _get_output_var_datatype(passed_var=trial_output_var)
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logger.info(f'Output var: {var_name}; output location: {output_location}')
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in_box_path = _get_output_var_in_box_path(user_id=user_id, output_location=output_location)
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mount_path = _get_var_mount_path(var_section=var_section)
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var_box_path = StartVarBoxPath(in_box_path=in_box_path, box=var_box, mount_path=mount_path)
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sv = TrialStartVar(name=var_name, box_path=var_box_path, files_location=output_location,
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datatype=datatype, content_type=content_type)
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return sv
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async def _get_internal_var_location(http_client: AsyncClient,
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|||
|
|
app_name: str,
|
|||
|
|
user_id: str,
|
|||
|
|
var_box: ConnectedBox,
|
|||
|
|
var_section: dict):
|
|||
|
|
var_name = var_section['name']
|
|||
|
|
|
|||
|
|
if var_box.dataset_ref_box_name:
|
|||
|
|
logger.info(f'For internal var {var_name} dataset is used')
|
|||
|
|
return None
|
|||
|
|
|
|||
|
|
box_section = None
|
|||
|
|
if 'mountFrom' in var_section:
|
|||
|
|
mount_from_section = var_section['mountFrom']
|
|||
|
|
if 'box' in mount_from_section:
|
|||
|
|
box_section = mount_from_section['box']
|
|||
|
|
|
|||
|
|
# если задан boxPath, то локация не создается
|
|||
|
|
if box_section and ('boxPath' in box_section):
|
|||
|
|
logger.info(f'For internal var {var_name} boxPath is used')
|
|||
|
|
return None
|
|||
|
|
|
|||
|
|
# иначе нужно создать пустую локацию; генерируется уникальное имя файловой группы,
|
|||
|
|
# Files API не поддерживает генерацию имен при создании пустых файловых групп;
|
|||
|
|
path = str(uuid.uuid4()) + '/'
|
|||
|
|
|
|||
|
|
await _create_file_group(http_client, app_name, user_id, var_box.s3_box_name, path)
|
|||
|
|
|
|||
|
|
logger.info(f'Internal var: {var_name}; internal location: {path}')
|
|||
|
|
|
|||
|
|
return path
|
|||
|
|
|
|||
|
|
|
|||
|
|
def _get_internal_var_in_box_path(user_id: str,
|
|||
|
|
var_box: ConnectedBox,
|
|||
|
|
var_section: dict,
|
|||
|
|
internal_location: str | None):
|
|||
|
|
var_name = var_section['name']
|
|||
|
|
|
|||
|
|
box_section = None
|
|||
|
|
if 'mountFrom' in var_section:
|
|||
|
|
mount_from_section = var_section['mountFrom']
|
|||
|
|
if 'box' in mount_from_section:
|
|||
|
|
box_section = mount_from_section['box']
|
|||
|
|
|
|||
|
|
static_box_path = var_box.dataset_ref_box_name or (box_section and ('boxPath' in box_section))
|
|||
|
|
|
|||
|
|
if static_box_path and internal_location:
|
|||
|
|
logger.error(f'Bug. Cannot use internal var {var_name} location'
|
|||
|
|
f' if boxPath or mountDataset is defined in pipeline specification')
|
|||
|
|
raise HTTPException(status_code=500,
|
|||
|
|
detail=f'Internal server error')
|
|||
|
|
if not static_box_path and not internal_location:
|
|||
|
|
logger.error(f'Bug. Internal var location not passed and bot boxPath, mountDataset not specified '
|
|||
|
|
f'for internal var {var_name}.')
|
|||
|
|
raise HTTPException(status_code=500,
|
|||
|
|
detail=f'Internal server error')
|
|||
|
|
|
|||
|
|
in_box_path = None
|
|||
|
|
# либо boxPath и mountDataset не указаны в спецификации, и создается пустая файловая группа,
|
|||
|
|
# internal_location содержит ее значение;
|
|||
|
|
if internal_location:
|
|||
|
|
in_box_path = get_path_inside_box(user_id, internal_location)
|
|||
|
|
# либо boxPath или mountDataset указаны в спецификации;
|
|||
|
|
if static_box_path:
|
|||
|
|
if var_box.dataset_ref_box_name:
|
|||
|
|
in_box_path = ""
|
|||
|
|
elif box_section and ('boxPath' in box_section):
|
|||
|
|
in_box_path = box_section['boxPath']
|
|||
|
|
if in_box_path is not None and in_box_path.startswith('/'):
|
|||
|
|
in_box_path = in_box_path.lstrip('/')
|
|||
|
|
|
|||
|
|
return in_box_path
|
|||
|
|
|
|||
|
|
|
|||
|
|
def _get_internal_var_datatype():
|
|||
|
|
return 'FILE'
|
|||
|
|
|
|||
|
|
|
|||
|
|
async def _construct_internal_var(http_client: AsyncClient,
|
|||
|
|
app_name: str,
|
|||
|
|
user_id: str,
|
|||
|
|
pipeline_name: str,
|
|||
|
|
connected_boxes: list[ConnectedBox],
|
|||
|
|
var_section: dict) -> TrialStartVar:
|
|||
|
|
var_name = var_section['name']
|
|||
|
|
|
|||
|
|
box_section = None
|
|||
|
|
if 'mountFrom' in var_section:
|
|||
|
|
mount_from_section = var_section['mountFrom']
|
|||
|
|
if 'box' in mount_from_section:
|
|||
|
|
box_section = mount_from_section['box']
|
|||
|
|
|
|||
|
|
var_box = _get_var_box(user_id=user_id,
|
|||
|
|
pipeline_name=pipeline_name,
|
|||
|
|
connected_boxes=connected_boxes,
|
|||
|
|
box_section=box_section)
|
|||
|
|
|
|||
|
|
internal_location = await _get_internal_var_location(http_client=http_client,
|
|||
|
|
app_name=app_name,
|
|||
|
|
user_id=user_id,
|
|||
|
|
var_box=var_box,
|
|||
|
|
var_section=var_section)
|
|||
|
|
datatype = _get_internal_var_datatype()
|
|||
|
|
|
|||
|
|
in_box_path = _get_internal_var_in_box_path(user_id=user_id,
|
|||
|
|
var_box=var_box,
|
|||
|
|
var_section=var_section,
|
|||
|
|
internal_location=internal_location)
|
|||
|
|
mount_path = _get_var_mount_path(var_section=var_section)
|
|||
|
|
var_box_path = StartVarBoxPath(in_box_path=in_box_path, box=var_box, mount_path=mount_path)
|
|||
|
|
|
|||
|
|
sv = TrialStartVar(name=var_name, box_path=var_box_path, files_location=internal_location,
|
|||
|
|
datatype=datatype)
|
|||
|
|
|
|||
|
|
return sv
|
|||
|
|
|
|||
|
|
|
|||
|
|
def _determine_start_vars_spec(pipeline_api_spec, pipeline_spec):
|
|||
|
|
result = input_vars_specs, output_vars_specs, internal_vars_specs = {}, {}, {}
|
|||
|
|
|
|||
|
|
if 'apiSpec' not in pipeline_api_spec:
|
|||
|
|
return result
|
|||
|
|
|
|||
|
|
pipeline_vars = pipeline_spec['vars']
|
|||
|
|
api_spec = pipeline_api_spec['apiSpec']
|
|||
|
|
|
|||
|
|
inputs_names = {i['name'] for i in api_spec['inputs']} if 'inputs' in api_spec else set()
|
|||
|
|
input_vars_specs.update({v['name']: v for v in pipeline_vars if v['name'] in inputs_names})
|
|||
|
|
|
|||
|
|
outputs_names = {o['name'] for o in api_spec['outputs']} if 'outputs' in api_spec else set()
|
|||
|
|
output_vars_specs.update({v['name']: v for v in pipeline_vars if v['name'] in outputs_names})
|
|||
|
|
|
|||
|
|
internal_vars_specs.update({v['name']: v for v in pipeline_vars if v['name'] not in (inputs_names | outputs_names)})
|
|||
|
|
|
|||
|
|
return result
|
|||
|
|
|
|||
|
|
|
|||
|
|
async def construct_start_vars(http_client: AsyncClient,
|
|||
|
|
app_name: str,
|
|||
|
|
user_id: str,
|
|||
|
|
pipeline_name: str,
|
|||
|
|
pipeline_api_spec: dict,
|
|||
|
|
pipeline_spec: dict,
|
|||
|
|
connected_boxes: list[ConnectedBox],
|
|||
|
|
passed_trial_inputs: list[TrialInput],
|
|||
|
|
passed_trial_output_vars: list[TrialOutputVar]) \
|
|||
|
|
-> tuple[list[TrialStartVar], list[TrialStartVar], list[TrialStartVar]]:
|
|||
|
|
input_vars_specs, output_vars_specs, internal_vars_specs = _determine_start_vars_spec(pipeline_api_spec,
|
|||
|
|
pipeline_spec)
|
|||
|
|
|
|||
|
|
input_vars = []
|
|||
|
|
# входные данные прошли валидацию, поэтому считаются корректными;
|
|||
|
|
# поэтому для каждого переданного входа отыскивается спецификация в ресурсе пайплайна;
|
|||
|
|
for i in passed_trial_inputs:
|
|||
|
|
# исключение - когда за пайплайном следует другой пайплайн, и переданные данные
|
|||
|
|
# относятся к нему;
|
|||
|
|
if i.name not in input_vars_specs:
|
|||
|
|
continue
|
|||
|
|
input_var_spec = input_vars_specs[i.name]
|
|||
|
|
input_var = await _construct_input_var(http_client=http_client,
|
|||
|
|
app_name=app_name,
|
|||
|
|
user_id=user_id,
|
|||
|
|
pipeline_name=pipeline_name,
|
|||
|
|
connected_boxes=connected_boxes,
|
|||
|
|
var_section=input_var_spec,
|
|||
|
|
var_input=i)
|
|||
|
|
input_vars.append(input_var)
|
|||
|
|
|
|||
|
|
output_vars = []
|
|||
|
|
# аналогично
|
|||
|
|
for o in passed_trial_output_vars:
|
|||
|
|
if o.name not in output_vars_specs:
|
|||
|
|
continue
|
|||
|
|
output_var_spec = output_vars_specs[o.name]
|
|||
|
|
output_var = await _construct_output_var(http_client=http_client,
|
|||
|
|
app_name=app_name,
|
|||
|
|
user_id=user_id,
|
|||
|
|
pipeline_name=pipeline_name,
|
|||
|
|
connected_boxes=connected_boxes,
|
|||
|
|
var_section=output_var_spec,
|
|||
|
|
trial_output_var=o)
|
|||
|
|
output_vars.append(output_var)
|
|||
|
|
|
|||
|
|
# а в данном случае берутся все внутренние переменные,
|
|||
|
|
# которые специфицированы в пайплайне (входные значения для них не передаются)
|
|||
|
|
internal_vars = [await _construct_internal_var(http_client=http_client,
|
|||
|
|
app_name=app_name,
|
|||
|
|
user_id=user_id,
|
|||
|
|
pipeline_name=pipeline_name,
|
|||
|
|
connected_boxes=connected_boxes,
|
|||
|
|
var_section=v)
|
|||
|
|
for v in internal_vars_specs.values()]
|
|||
|
|
|
|||
|
|
return input_vars, output_vars, internal_vars
|